without - xcode gcc
Can't compile a C program on a Mac after upgrading to Catalina 10.15 (5)
There's a previous question Can't compile C program on a Mac after upgrade to Mojave , and the answers to that have covered most of the variations on what goes wrong.
Now — as of Monday 2019-10-07 — you can upgrade to macOS Catalina 10.15. Once again, during the upgrade, the
directory has been blown away by the update, even though XCode 11.0 was installed before upgrading (from Mojave 10.14.6) to Catalina. Consequently, compilers built to expect that there is a
directory do not work any longer.
The main recommended step for the Mojave issues — using the command:
does not work out of the gate because the directory
does not exist (so there's not yet a
file to open).
Is there a good (official) way to create and populate the directory
It appears that Apple considers
as something that has gone the way of the dodo — it is extinct — or maybe it's like Monty Python's
Using the Apple-provided GCC (actually, that's Clang by any other name, as the version information shows) or Clang avoids problems. Both
will find the system libraries four directory levels below:
If you build your own GCC or other compiler, you will (probably) need to configure it to find the system libraries under the Xcode application directory.
Immediately after the upgrade, I ran XCode 11.0. It wanted to install some extra components, so I let it do so. However, that did not reinstate
or the directory under
One of the other bits of advice in the previous question was to run:
When doing so, it claimed that it downloaded the command line utilities, and it ensured that
etc were present. That's a useful step (though I didn't definitively check whether they were present before).
$ /usr/bin/gcc --version Configured with: --prefix=/Applications/Xcode.app/Contents/Developer/usr --with-gxx-include-dir=/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/c++/4.2.1 Apple clang version 11.0.0 (clang-1184.108.40.206) Target: x86_64-apple-darwin19.0.0 Thread model: posix InstalledDir: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin $
, it is now possible to compile programs:
$ make CC=/usr/bin/gcc al co RCS/al.c,v al.c RCS/al.c,v --> al.c revision 1.7 done /usr/bin/gcc -I/Users/jleffler/inc -g -O3 -std=c11 -pedantic -Wall -Wextra -Werror -Wshadow -Wmissing-prototypes -Wpointer-arith -Wold-style-definition -Wcast-qual -Wstrict-prototypes -DHAVE_MEMMEM -DHAVE_STRNDUP -DHAVE_STRNLEN -DHAVE_GETDELIM -o al al.c -L/Users/jleffler/lib/64 -ljl $
is still missing. There is a directory under
$ ls /Library/Developer CommandLineTools PrivateFrameworks $ ls /Library/Developer/CommandLineTools Library SDKs usr $ ls /Library/Developer/CommandLineTools/SDKs MacOSX.sdk MacOSX10.14.sdk MacOSX10.15.sdk $ ls /Library/Developer/CommandLineTools/SDKs/MacOSX10.15.sdk/ Entitlements.plist SDKSettings.json System Library SDKSettings.plist usr $
directory contain anything very promising.
When all else fails, read the manual
Next step — find and read the release notes:
There's no information in there that relates to this. So, the probability is (AFAICS, after only an hour or two's effort) that Apple no longer support
— though it does still have a fully-loaded
Time to check another compilation with GCC option
added (in the makefile I used, setting
adds the option to C compiler command line):
$ make UFLAGS=-v CC=/usr/bin/gcc ww co RCS/ww.c,v ww.c RCS/ww.c,v --> ww.c revision 4.9 done /usr/bin/gcc -I/Users/jleffler/inc -g -O3 -std=c11 -pedantic -Wall -Wextra -Werror -Wshadow -Wmissing-prototypes -Wpointer-arith -Wold-style-definition -Wcast-qual -Wstrict-prototypes -DHAVE_MEMMEM -DHAVE_STRNDUP -DHAVE_STRNLEN -DHAVE_GETDELIM -v -o ww ww.c -L/Users/jleffler/lib/64 -ljl Apple clang version 11.0.0 (clang-1220.127.116.11) Target: x86_64-apple-darwin19.0.0 Thread model: posix InstalledDir: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin "/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/clang" -cc1 -triple x86_64-apple-macosx10.15.0 -Wdeprecated-objc-isa-usage -Werror=deprecated-objc-isa-usage -emit-obj -disable-free -disable-llvm-verifier -discard-value-names -main-file-name ww.c -mrelocation-model pic -pic-level 2 -mthread-model posix -mdisable-fp-elim -fno-strict-return -masm-verbose -munwind-tables -target-sdk-version=10.15 -target-cpu penryn -dwarf-column-info -debug-info-kind=standalone -dwarf-version=4 -debugger-tuning=lldb -ggnu-pubnames -target-linker-version 512.4 -v -resource-dir /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/lib/clang/11.0.0 -isysroot /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk -I /Users/jleffler/inc -D HAVE_MEMMEM -D HAVE_STRNDUP -D HAVE_STRNLEN -D HAVE_GETDELIM -I/usr/local/include -O3 -Wall -Wextra -Werror -Wshadow -Wmissing-prototypes -Wpointer-arith -Wold-style-definition -Wcast-qual -Wstrict-prototypes -Wno-framework-include-private-from-public -Wno-atimport-in-framework-header -Wno-extra-semi-stmt -Wno-quoted-include-in-framework-header -pedantic -std=c11 -fdebug-compilation-dir /Users/jleffler/src/cmd -ferror-limit 19 -fmessage-length 110 -stack-protector 1 -fstack-check -mdarwin-stkchk-strong-link -fblocks -fencode-extended-block-signature -fregister-global-dtors-with-atexit -fobjc-runtime=macosx-10.15.0 -fmax-type-align=16 -fdiagnostics-show-option -fcolor-diagnostics -vectorize-loops -vectorize-slp -o /var/folders/77/zx9nk6dn7_dg4xd4stvt42v00000gn/T/ww-4cb85b.o -x c ww.c clang -cc1 version 11.0.0 (clang-118.104.22.168) default target x86_64-apple-darwin19.0.0 ignoring nonexistent directory "/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/local/include" ignoring nonexistent directory "/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/Library/Frameworks" #include "..." search starts here: #include <...> search starts here: /Users/jleffler/inc /usr/local/include /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/lib/clang/11.0.0/include /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/include /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/System/Library/Frameworks (framework directory) End of search list. "/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld" -demangle -lto_library /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/lib/libLTO.dylib -dynamic -arch x86_64 -macosx_version_min 10.15.0 -syslibroot /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk -o ww -L/Users/jleffler/lib/64 /var/folders/77/zx9nk6dn7_dg4xd4stvt42v00000gn/T/ww-4cb85b.o -ljl -L/usr/local/lib -lSystem /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/lib/clang/11.0.0/lib/darwin/libclang_rt.osx.a "/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/dsymutil" -o ww.dSYM ww $
The key information in that blizzard of data is:
That's effectively the 'root' directory for the compilation, so there should be sub-directories under that for
$ ls /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk Entitlements.plist SDKSettings.json System Library SDKSettings.plist usr $ ls /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr bin include lib libexec share $ ls /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include AppleTextureEncoder.h dns_util.h memory.h simd AssertMacros.h dtrace.h menu.h slapi-plugin.h Availability.h editline miscfs spawn.h AvailabilityInternal.h err.h module.modulemap sqlite3.h AvailabilityMacros.h errno.h monetary.h sqlite3ext.h AvailabilityVersions.h eti.h monitor.h stab.h …lots more lines… dirent.h mach-o security xcselect.h disktab.h mach_debug semaphore.h xlocale dispatch machine servers xlocale.h dlfcn.h malloc setjmp.h xpc dns.h math.h sgtty.h zconf.h dns_sd.h membership.h signal.h zlib.h $
This shows that the mile-long and totally unmemorable directory name does contain the standard C and POSIX headers, plus Apple-specific extras.
directory appears to be intact; the warning about
not existing under the
is harmless (and not visible without the
Before you proceed, make sure to install xcode command line tools.
Actually, you can do it! Actually all the C headers are found here in this folder:
We just need to create symlink for all the headers file into this folder:
It worked for me! the following command line will take care of all the problems:
sudo ln -s /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/* /usr/local/include/
You will get some warning. Some of the headers already exists, like this:
ln: /usr/local/include//tcl.h: File exists ln: /usr/local/include//tclDecls.h: File exists ln: /usr/local/include//tclPlatDecls.h: File exists ln: /usr/local/include//tclTomMath.h: File exists ln: /usr/local/include//tclTomMathDecls.h: File exists ln: /usr/local/include//tk.h: File exists ln: /usr/local/include//tkDecls.h: File exists ln: /usr/local/include//tkPlatDecls.h: File exists
totally ok to ignore. that's all.
I am a newbie with C++ compiler for R in OSX and I got the same issue that C++ could not find the header after OS was updated ( missing math.h although it was there ). I followed instructions from https://thecoatlessprofessor.com/programming/cpp/r-compiler-tools-for-rcpp-on-macos/ but nothing changed.
Finally, it worked for me after I reinstalled the Xcode CLI
and then change the flags to Var as @Coatless suggested:
export CFLAGS=-isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk export CCFLAGS=-isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk export CXXFLAGS=-isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk export CPPFLAGS=-isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk
In my case I seemed to have
also installed using homebrew. When I removed those, and thus relied fully on the macOS clang, it could find the headers and the compiling worked again.
apue.h dependency was still missing in my
Komol Nath Roy
answer in this question.
I downloaded the dependency manually from git and placed it in